Everything about Nucleoside totally explained
Nucleosides are
glycosylamines made by attaching a
nucleobase (often referred to simply as base) to a
ribose or
deoxyribose ring. Examples of these include
cytidine,
uridine,
adenosine,
guanosine,
thymidine and
inosine. In short, a nucleoside is a base linked to sugar.
Nucleosides can be
phosphorylated by specific
kinases in the cell, producing
nucleotides, which are the molecular building blocks of
DNA and
RNA.
Nucleosides are produced as the second step in
nucleic acid digestion, whereby
nucleotidases break down
nucleotides (such as the
thymine nucleotide) into
nucleosides (such as
thymidine) and phosphate. The nucleosides, in turn, are subsequently broken down
Nucleosides differ from nucleotides by having a
hydroxyl group attached to carbon number 5 (the one that isn't in the ring) of the ribose, rather than one or more phosphate groups.
In medicine several
nucleoside analogues are used as antiviral or anticancer agents. The viral polymerase incorporates these compounds with non-canon bases. These compounds are activated in the cells by being converted into nucleotides, they're administered as nuclosides since charged nucleotides can't easily cross cell membranes.
In molecular biology several
analogues of the sugar back bone exist. Due to the low stability of RNA, which is prone to hydrolysis, several more stable alternative nucleoside/nucleotide analogues are used which correctly bind to RNA. This is achieved by using a different backbone sugar. These analogues include
LNA,
morpholino,
PNA.
In sequencing
dideoxynucleotides are used. These nucleotides possess a non-canon sugar, dideoxyribose which lacks 3' hydroxyl group (which accepts the phosphate) and therefore can't bond with the next base, terminating the chain as DNA polymerases mistake it for a regular deoxyribonucleotide.
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